Package kmer.exercise

Class AtomicIntegerArrayKMerCounter

java.lang.Object

kmer.exercise.AbstractArrayKMerCounter

kmer.exercise.AtomicIntegerArrayKMerCounter

All Implemented Interfaces:

BalancedKMerCounter, KMerCounter

public class AtomicIntegerArrayKMerCounter
extends AbstractArrayKMerCounter
implements BalancedKMerCounter

Author:

__STUDENT_NAME__, Dennis Cosgrove

Constructor Summary

Constructors

Constructor	Description
AtomicIntegerArrayKMerCounter(KMerBalancer balancer)

Method Summary

Modifier and Type	Method	Description
KMerBalancer	balancer()
AtomicIntegerArrayKMerResults	parse(List<byte[]> sequences, int k)

Methods inherited from class kmer.exercise.AbstractArrayKMerCounter

totalPossibleKMers

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

AtomicIntegerArrayKMerCounter

public AtomicIntegerArrayKMerCounter(KMerBalancer balancer)

Method Details

balancer

public KMerBalancer balancer()

Specified by:

balancer in interface BalancedKMerCounter

parse

public AtomicIntegerArrayKMerResults parse(List<byte[]> sequences,
 int k)
                                    throws InterruptedException,
ExecutionException

Specified by:

parse in interface KMerCounter

Throws:

InterruptedException

ExecutionException