Package kmer.core.results

Class AtomicIntegerArrayKMerResults

java.lang.Object

kmer.core.results.AbstractArrayKMerResults

kmer.core.results.AtomicIntegerArrayKMerResults

All Implemented Interfaces:

KMerResults

public class AtomicIntegerArrayKMerResults
extends AbstractArrayKMerResults

A KMerResults implementation that wraps an AtomicIntegerArray.

Author:

Dennis Cosgrove

Nested Class Summary

Nested classes/interfaces inherited from class kmer.core.results.AbstractArrayKMerResults

AbstractArrayKMerResults.IndexableIntegersIterator

Constructor Summary

Constructors

Constructor	Description
AtomicIntegerArrayKMerResults(int k, AtomicIntegerArray atomicIntegerArray)

Method Summary

Modifier and Type	Method	Description
Iterable<KMerResult>	encounters()
protected int	lookupCount(int index)

Methods inherited from class kmer.core.results.AbstractArrayKMerResults

lookupCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

AtomicIntegerArrayKMerResults

public AtomicIntegerArrayKMerResults(int k,
 AtomicIntegerArray atomicIntegerArray)

Method Details

lookupCount

protected int lookupCount(int index)

Specified by:

lookupCount in class AbstractArrayKMerResults

encounters

public Iterable<KMerResult> encounters()