Table 2. Summary of the prediction results on aligned RNA sequences.
|
RNA |
MWM |
ILM |
||||
|
TP
(SS) |
SP |
K |
TP
(SS) |
SP |
K |
|
|
5S
rRNA |
32(80.0) |
58.2 |
0/0 |
38(95.0) |
95.0 |
0/0 |
|
SRP
RNA |
68(87.2) |
59.6 |
1/1 |
76(97.4) |
75.2 |
1/1 |
|
Telomerase
RNA |
29(58.0) |
24.0 |
1/1 |
45(90.0) |
60.0 |
1/1 |
|
tmRNA |
73(68.9) |
42.7 |
3/4 |
93(87.7) |
73.8 |
4/4 |
|
16S
RNA |
243(50.8) |
35.5 |
0/2 |
351(73.4) |
68.2 |
1/2 |
|
TP
= number of correctly predicted base-pairs SS
= 100 X TP / EP SP
= 100 X TP/(EP+FP) K
= (number of pseudoknots correctly predicted) /
(expected number of pseudoknots) EP
= expected number of base-pairs in the reference structure FP = number of predicted base-pairs that do not
exist in the reference structure |
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